This study aimed to profile the physiological characteristics of junior sprint kayak athletes (n = 21, VO2max 4.1 ± 0.7 L/min, training experience 2.7 ± 1.2 y) and to establish the relationship between physiological variables (VO2max, VO2 kinetics, muscle-oxygen kinetics, paddling efficiency) and sprint kayak performance. VO2max, power at VO2max, power:weight ratio, paddling efficiency, VO2 at lactate threshold, and whole-body and muscle oxygen kinetics were determined on a kayak ergometer in the laboratory. Separately, on-water time trials (TT) were completed over 200 m and 1000 m. Large to nearly perfect (−.5 to −.9) inverse relationships were found between the physiological variables and on-water TT performance across both distances. Paddling efficiency and lactate threshold shared moderate to very large correlations (−.4 to −.7) with 200- and 1000-m performance. In addition, trivial to large correlations (−.11 to −.5) were observed between muscle-oxygenation parameters, muscle and whole-body oxygen kinetics, and performance. Multiple regression showed that 88% of the unadjusted variance for the 200-m TT performance was explained by VO2max, peripheral muscle deoxygenation, and maximal aerobic power (P < .001), whereas 85% of the unadjusted variance in 1000-m TT performance was explained by VO2max and deoxyhemoglobin (P < .001). The current findings show that well-trained junior sprint kayak athletes possess a high level of relative aerobic fitness and highlight the importance of the peripheral muscle metabolism for sprint kayak performance, particularly in 200-m races, where finalists and nonfinalists are separated by very small margins. Such data highlight the relative aerobic-fitness variables that can be used as benchmarks for talent-identification programs or monitoring longitudinal athlete development. However, such approaches need further investigation.